PharmaGuru
IMPORTANT SOFTWARES
1) Chem. office / Chem. Draw Ultra (Version No. 10)
It is used to draw the structures of drug molecules in 2D and then to convert them in 3D, to find the IU PAC name of the unknown compound, to find the structure of the drug from its IUPAC name, to give NMR spectrum (approx.) of unknown drug.
2) Pymol, Rasmol, Jmol, Molmol, VMD
All these software are used to visualize the protein / peptide 3D structure.
3) 2D QSAR, 3D QSAR, CoMFA, CoMSIA
For finding the structure activity relationship
4) BLAST, FASTA, PROSPECTUS, COPIA
For sequence alignment of proteins, and nucleic acids.
5) Genscan, Glimmer
Gene finding and sequence analysis.
6) CLUSTAL W, CLUSTAL X
For sequence alignment of proteins..
7) AMBER, CHARMM, Chem2 pac, GROMOS, GROMACS, MOE, SCHRODINGER
3 D structure visualization, molecular dynamics, energy minimization
8) MM2, MOPAC, AM1, PM3
Molecular dynamics
9) Gaussian
For quantum chemistry calculations
10) Sigmastat
Used for statistical calculations.
IMPORTANT SOFTWARES
1) Chem. office / Chem. Draw Ultra (Version No. 10)
It is used to draw the structures of drug molecules in 2D and then to convert them in 3D, to find the IU PAC name of the unknown compound, to find the structure of the drug from its IUPAC name, to give NMR spectrum (approx.) of unknown drug.
2) Pymol, Rasmol, Jmol, Molmol, VMD
All these software are used to visualize the protein / peptide 3D structure.
3) 2D QSAR, 3D QSAR, CoMFA, CoMSIA
For finding the structure activity relationship
4) BLAST, FASTA, PROSPECTUS, COPIA
For sequence alignment of proteins, and nucleic acids.
5) Genscan, Glimmer
Gene finding and sequence analysis.
6) CLUSTAL W, CLUSTAL X
For sequence alignment of proteins..
7) AMBER, CHARMM, Chem2 pac, GROMOS, GROMACS, MOE, SCHRODINGER
3 D structure visualization, molecular dynamics, energy minimization
8) MM2, MOPAC, AM1, PM3
Molecular dynamics
9) Gaussian
For quantum chemistry calculations
10) Sigmastat
Used for statistical calculations.
No comments:
Post a Comment
Comments and Suggestion